Protocols

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  1. Pulsed-field gel electrophoresis with clamped uniform electric field In clamped homogeneous electric field (CHEF) gel electrophoresis, the electric field is generated by multiple electrodes. These electrodes are arranged in a qua
  2. Rapid isolation of mammalian DNA Mammalian DNA prepared according to this protocol is approximately 20-50 kb and is suitable for use as a template for PCR reactions. the DNA yield varies betwee
  3. Southern blotting (DNA transfer from one agarose gel to two membranes simultaneously) DNA can be transferred from both sides of the agarose to both membranes simultaneously. This method is useful when the same restriction endonuclease fragment ne
  4. Purification of RNA from tissues and cells by acid phenol-guanidine thiocyanate-chloroform extraction The cellular RNAase should be inactivated as soon as possible during the first stage of the extraction process. Once the endogenous RNAase is destroyed, the pos
  5. Screening poly (A)+ RNA by batch chromatographic methods When working with many RNA samples or working with small amounts of total mammalian RNA (<50 μg), a batch chromatography method with oligo (dT)-cellulose is
  6. Ribonuclease protection (mapping of RNA with ribonuclease and radiolabeled RNA probes) Ribonuclease protection analysis is used to measure the abundance of specific mRNAs and to map their topological heterogeneity. This method involves hybridizati
  7. Random priming method (radiolabeling of DNA using random oligonucleotide extensions in the presence of melted agarose) This method can be used for radiolabeling of DNA recovered from low melting point agarose gels (Feinberg and Vogelstein 1983, 1984). This experiment is based on
  8. Application of mixed oligonucleotide primer-guided cDNA amplification (MOPAC) The best way to clone a protein for which only part of the sequence is known is to design an oligonucleotide using the known amino acid sequence and use this ol
  9. Labeling of DNA by random primer method Using oligonucleotides as primers, DNA polymerase can initiate DNA synthesis along a single-stranded template (Gotilian 1969). If the sequences of the oligonucl
  10. Rapid amplification of cDNA 5' ends (5'-RACE) There is no greater failure in molecular cloning than the isolation of a cDNA clone that lacks the characteristic structure of the sequence at the 5' end of the
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